In the dawn of the 21st century, magic, long thought to be folklore and fairy tales, has become a systematized technology and is taught as a technical skill. In First High School, the institution for magicians, students are segregated into two groups based on their entrance exam scores: "Blooms," those who receive high scores, are assigned to the First Course, while "Weeds" are reserve students assigned to the Second Course. Mahouka Koukou no Rettousei follows the siblings, Tatsuya and Miyuki Shiba, who are enrolled in First High School. Upon taking the exam, the prodigious Miyuki is placed in the First Course, while Tatsuya is relegated to the Second Course. Though his practical test scores and status as a "Weed" show him to be magically inept, he possesses extraordinary technical knowledge, physical combat capabilities, and unique magic techniques—making Tatsuya the irregular at a magical high school.

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In the story, the seasons have changed and it will soon be the second spring. Tatsuya and Miyuki have finished their first year at First Magic High School and are on their spring break. The two go to their villa on the Ogasawara Island archipelago. After only a small moment of peace a lone young woman named Kokoa appears before them. She has abandoned the Naval base and she tells Tatsuya her one wish.

Shiba Miyuki's classmate Kitayama Shizuku is on her way to study abroad. For magicians, this is normally impossible, since allowing the genes of someone who can use magic outside their home country's borders is tantamount to giving up national secrets. But it's allowed to happen in one case-exchange programs. And that's how Angelina Kudou Shields has arrived in Japan from the USNA to study at First High. Around the time Lina arrived in Japan magicians began getting attacked by a mysterious being who leaves his victims drained of blood. Will Tatsuya be able to discover the identity of the "Vampire"?

Shiba Miyuki's classmate Kitayama Shizuku is on her way to study abroad. For magicians, this is normally impossible, since allowing the genes of someone who can use magic outside their home country's borders is tantamount to giving up national secrets. But it's allowed to happen in one case-exchange programs. And that's how Angelina Kudou Shields has arrived in Japan from the USNA to study at First High. Around the time Lina arrived in Japan magicians began getting attacked by a mysterious being who leaves his victims drained of blood. Will Tatsuya be able to discover the identity of the "Vampire"?

Looking at Miyuki and Tatsuya now, it might be hard to imagine them as anything other than loving siblings. But it wasn't always this way.. Three years ago, Miyuki was always uncomfortable around her older brother. The rest of their family treated him no better than a lowly servant, even though he was the perfect Guardian, watching over Miyuki while she lived a normal middle school life. But what really bothered her was that he never showed any emotions or thoughts of his own. However, when danger comes calling during a fateful trip to Okinawa, their relationship as brother and sister will change forever…

Looking at Miyuki and Tatsuya now, it might be hard to imagine them as anything other than loving siblings. But it wasn't always this way.. Three years ago, Miyuki was always uncomfortable around her older brother. The rest of their family treated him no better than a lowly servant, even though he was the perfect Guardian, watching over Miyuki while she lived a normal middle school life. But what really bothered her was that he never showed any emotions or thoughts of his own. However, when danger comes calling during a fateful trip to Okinawa, their relationship as brother and sister will change forever…

A century has passed since magic—true magic, the stuff of legends—has returned to the world. It is spring, the season of new beginnings, and a new class of students is about to begin their studies at the First National Magic University Affiliated High School, nickname: First High. A manga spin-off of the immensely popular light novel series Mahouka Koukou no Rettousei (The Irregular at Magic High School), Mahouka Koukou no Yuutousei (The Honor Student at Magic High School) follows the events of the original series as seen through the eyes of Miyuki Shiba, Tatsuya's sister. The life of an honor student comes with a lot of expectations...and unexpected hidden feelings?!

It has been a century since "true magic"—initially thought to be merely folklore and legend—had become commonplace technology worldwide. First National Magic University Affiliated High School (First High), one of the nine magic academies in Japan, admits two skilled siblings—Miyuki and Tatsuya Shiba—into the academy. First High splits its students into two groups, Course 1 and Course 2, based on entrance exam scores. This causes an apparent disdain for the Course 2 students, as they are labeled "Weeds" by Course 1 students, who alternatively call themselves "Blooms." Tatsuya is admitted to Course 2, while his sister Miyuki joins Course 1 as an honor student. Miyuki wishes to show First High that, despite her brother being labeled as inept, he is among the best magicians in the whole world. Mahouka Koukou no Yuutousei retells the story of Mahouka Koukou no Rettousei from the point of view of Miyuki and the other female characters.

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Yume Kikuchi, a girl who can use magic, goes to Tokyo to be an apprentice mage to the handsome Masami Oyamada (a professional mage). In Tokyo, Yume learns about magic, helping people, and various other things on her way to being a mage. But she soon also finds out that even just magic alone isn't enough to make someone truly happy...